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  5. Len_g23489

Len_g23489


Description : component *(TRM732) of TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex & original description: none


Gene families : OG0006426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23489

Target Alias Description ECC score Gene Family Method Actions
AT3G55160 No alias unknown protein; EXPRESSED IN: 11 plant structures;... 0.02 OrthoFinder output from all 47 species
GSVIVT01011388001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Gb_02094 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Gb_02096 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Gb_02097 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07290.1 LOC_Os08g07290 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Smo74297 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Tin_g45835 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.04 OrthoFinder output from all 47 species
Zm00001e040139_P001 Zm00001e040139 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!