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  5. Len_g23479

Len_g23479


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23479

Target Alias Description ECC score Gene Family Method Actions
Adi_g007222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11176.t1 Aspi01Gene11176 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G073500.1 Ceric.11G073500 not classified & original description: pacid=50594821... 0.04 OrthoFinder output from all 47 species
Dac_g10259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.03 OrthoFinder output from all 47 species
Msp_g43565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015817_P001 Zm00001e015817 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.03 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031085_P001 Zm00001e031085 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 113.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 1 63
No external refs found!