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  5. Len_g23191

Len_g23191


Description : TCX/CPP-type transcription factor & original description: none


Gene families : OG0003303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23191

Target Alias Description ECC score Gene Family Method Actions
AT4G29000 No alias Tesmin/TSO1-like CXC domain-containing protein 0.02 OrthoFinder output from all 47 species
Als_g48010 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11545 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.33 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.02 OrthoFinder output from all 47 species
Dac_g13587 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015363001 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 OrthoFinder output from all 47 species
MA_10432959g0010 No alias CPP1-like transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g07690 No alias TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031045_P003 Zm00001e031045 CPP1-like transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 251 286
IPR005172 CRC 166 200
No external refs found!