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  5. Len_g23146

Len_g23146


Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23146
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 PG2,... Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00082380 USPL1, ATUSPL1,... BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00084450 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00088650 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
AMTR_s00059p00097920 ATRD22, RD22,... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00076p00180150 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G23760 JP630, PG3 BURP domain-containing protein 0.04 OrthoFinder output from all 47 species
AT1G60390 PG1 polygalacturonase 1 0.03 OrthoFinder output from all 47 species
AT1G70370 PG2 polygalacturonase 2 0.05 OrthoFinder output from all 47 species
Adi_g046811 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078180 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g127854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16373 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37883 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38151 ATRD22, RD22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09492 PG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g29822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33433 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63303 PG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34468.t1 ATRD22, RD22,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34471.t1 ATRD22, RD22,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34476.t1 ATRD22, RD22,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34479.t1 ATRD22, RD22,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34480.t1 ATRD22, RD22,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56875.t1 PG2, Aspi01Gene56875 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56877.t1 PG2, Aspi01Gene56877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72190.t1 USPL1, ATUSPL1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72191.t1 USPL1, ATUSPL1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0084.g039069 No alias not classified & original description: CDS=1-924 0.05 OrthoFinder output from all 47 species
Ceric.1Z105900.1 Ceric.1Z105900 not classified & original description: pacid=50639168... 0.03 OrthoFinder output from all 47 species
Ceric.35G007100.1 Ceric.35G007100 not classified & original description: pacid=50581709... 0.04 OrthoFinder output from all 47 species
Dac_g16859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26680 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10463 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20107 PG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035686001 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035693001 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_06614 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_18274 PG2 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
Gb_39304 ATRD22, RD22 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os05g12410.1 ATRD22, RD22,... BURP domain-containing protein 6 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os06g13240.1 PG1, LOC_Os06g13240 BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os08g29200.1 PG2, LOC_Os08g29200 non-catalytic polygalacturonase regulator 0.04 OrthoFinder output from all 47 species
LOC_Os08g38810.1 ATRD22, RD22,... BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os09g16010.1 PG2, LOC_Os09g16010 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
Len_g55574 PG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10182290g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_10425868g0010 USPL1, ATUSPL1 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_10436065g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_203282g0010 No alias BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_462957g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_565982g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5913418g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8888577g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11951 PG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g23690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53534 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g54700 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g109500.4.1 USPL1, ATUSPL1,... BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g062300.3.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Solyc02g062310.1.1 Solyc02g062310 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc02g062320.3.1 ATRD22, RD22,... BURP domain-containing protein 5 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc05g005570.3.1 PG2, Solyc05g005570 non-catalytic polygalacturonase regulator 0.02 OrthoFinder output from all 47 species
Solyc08g068130.1.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Spa_g12000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24622 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g29037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19046 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20244 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20830 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003438_P003 ATRD22, RD22,... Protein RAFTIN 1A OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Zm00001e003891_P006 Zm00001e003891 BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e019897_P001 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e022326_P001 PG2, Zm00001e022326 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
Zm00001e033843_P001 PG2, Zm00001e033843 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 170 380
No external refs found!