AT4G02430 (SR34b, At-SR34b)


Aliases : SR34b, At-SR34b

Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0001375 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001375_tree ,
OG_02_0001509 (LandPlants) Phylogenetic Tree(s): OG_02_0001509_tree ,
OG_03_0001416 (SeedPlants) Phylogenetic Tree(s): OG_03_0001416_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02430
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278239 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
MpVg00980.1 No alias No annotation 0.03 Archaeplastida
Solyc09g075090.1.1 No alias SR30/34 RNA splicing factor 0.04 Archaeplastida
GSVIVT01027997001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 LandPlants
Gb_13475 No alias SR30/34 RNA splicing factor 0.02 LandPlants
MpVg00980.1 No alias No annotation 0.03 LandPlants
Solyc09g075090.1.1 No alias SR30/34 RNA splicing factor 0.04 LandPlants
GSVIVT01027997001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 SeedPlants
Solyc09g075090.1.1 No alias SR30/34 RNA splicing factor 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0016926 protein desumoylation RCA Interproscan
BP GO:0050665 hydrogen peroxide biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 122 176
IPR000504 RRM_dom 9 75
No external refs found!