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  5. Len_g22878

Len_g22878


Description : not classified & original description: none


Gene families : OG0001892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22878

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G50030 No alias ARM-repeat/Tetratricopeptide repeat (TPR)-like protein 0.03 OrthoFinder output from all 47 species
Aob_g03453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21015 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g29686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25462.t1 Aspi01Gene25462 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009381001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g10980.1 LOC_Os03g10980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g12972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092783.1.1 Solyc02g092783 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g078170.2.1 Solyc04g078170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000721_P001 Zm00001e000721 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!