Smo125279 (PACid_15405458)


Aliases : PACid_15405458

Description : 31.4 cell.vesicle transport Might be involved in protein sorting to the vacuole. vacuolar protein sorting 41 (VPS41) FUNCTIONS IN: binding, nucleotide binding, zinc ion binding INVOLVED IN: gravitropism, protein targeting to vacuole EXPRESSED IN: 24 plant structures EXPRESSED DURING: 15 growth stages CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Zinc finger, RING-type (InterPro:IPR001841), WD40 repeat (InterPro:IPR001680), Vacuolar protein sorting-associated protein 41 (InterPro:IPR016902), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Armadillo-type fold (InterPro:IPR016024), WD40 repeat, subgroup (InterPro:IPR019781), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547) Has 13288 Blast hits to 4251 proteins in 360 species: Archae - 4 Bacteria - 340 Metazoa - 7814 Fungi - 1141 Plants - 584 Viruses - 346 Other Eukaryotes - 3059 (source: NCBI BLink). & (chl4|518284 : 111.0


Gene families : OG_01_0100551 (Gene family) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo125279
Cluster HCCA cluster: Cluster_70


Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 1 112
No external refs found!