AT4G02075 (PIT1)

Aliases : PIT1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0009096 (LandPlants) Phylogenetic Tree(s): OG_02_0009096_tree ,
OG_03_0007079 (SeedPlants) Phylogenetic Tree(s): OG_03_0007079_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02075
Cluster	HCCA: Cluster_218

Target	Alias	Description	ECC score	Gene Family Method
Gb_37740	No alias	RING-v-class E3 ligase	0.03	Archaeplastida
Solyc04g007600.4.1	No alias	RING-v-class E3 ligase	0.03	Archaeplastida
Solyc06g069780.4.1	No alias	RING-v-class E3 ligase	0.07	Archaeplastida
Zm00001e028572_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	20	65
IPR022143	DUF3675	72	176

External Links

No external refs found!