AT4G02070 (MSH6-1, ATMSH6, MSH6)


Aliases : MSH6-1, ATMSH6, MSH6

Description : MUTS homolog 6


Gene families : OG_01_0001515 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001515_tree ,
OG_02_0006028 (LandPlants) Phylogenetic Tree(s): OG_02_0006028_tree ,
OG_03_0005949 (SeedPlants) Phylogenetic Tree(s): OG_03_0005949_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02070
Cluster HCCA: Cluster_262


Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IBA Interproscan
MF GO:0000400 four-way junction DNA binding IBA Interproscan
BP GO:0000710 meiotic mismatch repair IBA Interproscan
MF GO:0003684 damaged DNA binding IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006290 pyrimidine dimer repair IMP Interproscan
BP GO:0006298 mismatch repair ISS Interproscan
BP GO:0007131 reciprocal meiotic recombination IBA Interproscan
MF GO:0008094 DNA-dependent ATPase activity IBA Interproscan
BP GO:0009411 response to UV IBA Interproscan
MF GO:0032137 guanine/thymine mispair binding IBA Interproscan
MF GO:0032138 single base insertion or deletion binding IBA Interproscan
CC GO:0032301 MutSalpha complex IBA Interproscan
BP GO:0043570 maintenance of DNA repeat elements IBA Interproscan
BP GO:0045910 negative regulation of DNA recombination IBA Interproscan
BP GO:0048451 petal formation RCA Interproscan
BP GO:0048453 sepal formation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007861 DNA_mismatch_repair_MutS_clamp 886 976
IPR000432 DNA_mismatch_repair_MutS_C 1080 1270
IPR007696 DNA_mismatch_repair_MutS_core 701 1017
IPR007860 DNA_mmatch_repair_MutS_con_dom 506 667
IPR007695 DNA_mismatch_repair_MutS-lik_N 380 495
No external refs found!