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  5. Len_g22552

Len_g22552 (GSL5, PMR4, ATGSL05,...)


Aliases : GSL5, PMR4, ATGSL05, ATGSL5, GSL05

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22552

Target Alias Description ECC score Gene Family Method Actions
AT3G59100 ATGSL11, gsl11 glucan synthase-like 11 0.03 OrthoFinder output from all 47 species
Aspi01Gene11664.t1 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51009.t1 GSL03, ATGSL3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05987 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75509 ATGSL01, GSL01,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10697 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17127 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49974 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08390 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000622001 GSL04, atgsl4,... Cell wall.callose.callose synthase 0.02 OrthoFinder output from all 47 species
MA_10426974g0030 GSL7, ATGSL07,... callose synthase 0.02 OrthoFinder output from all 47 species
Mp3g24830.1 GLS2, ATGSL02, CALS5 callose synthase 0.01 OrthoFinder output from all 47 species
Pir_g42856 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60182 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013336_P001 gsl12, ATGSL12,... Callose synthase 3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA Interproscan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA Interproscan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 871 1615
IPR026899 FKS1-like_dom1 144 253
No external refs found!