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  5. Len_g22465

Len_g22465 (SUVH3, SDG19)


Aliases : SUVH3, SDG19

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22465

Target Alias Description ECC score Gene Family Method Actions
Adi_g055363 SDG33, SUVH4, KYP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02398 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aop_g06509 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g05897 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
LOC_Os09g19830.1 SDG23, SUVH6,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
LOC_Os11g03700.1 SUVH1, LOC_Os11g03700 class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Solyc08g077940.2.1 SUVH5, SGD9,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Solyc10g077070.2.1 SUVH3, SDG19,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Spa_g07641 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Tin_g09790 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e004254_P001 SUVH5, SGD9,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 609 707
IPR003105 SRA_YDG 428 579
IPR001214 SET_dom 726 860
No external refs found!