AT4G01870

Description : tolB protein-related

Gene families : OG_01_0004014 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004014_tree ,
OG_02_0002532 (LandPlants) Phylogenetic Tree(s): OG_02_0002532_tree ,
OG_03_0002465 (SeedPlants) Phylogenetic Tree(s): OG_03_0002465_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G01870
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00058330	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AT1G21670	No alias	LOCATED IN: cell wall, plant-type cell wall; EXPRESSED...	0.04	Archaeplastida
Gb_15673	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_15674	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os07g44410.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc06g008620.1.1	No alias	no hits & (original description: none)	0.09	Archaeplastida
Zm00001e035667_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
AMTR_s00045p00058330	evm_27.TU.AmTr_v1...	No description available	0.04	LandPlants
AT1G21670	No alias	LOCATED IN: cell wall, plant-type cell wall; EXPRESSED...	0.04	LandPlants
Gb_15673	No alias	no hits & (original description: none)	0.03	LandPlants
Gb_15674	No alias	no hits & (original description: none)	0.03	LandPlants
LOC_Os07g44410.1	No alias	no hits & (original description: none)	0.02	LandPlants
Solyc06g008620.1.1	No alias	no hits & (original description: none)	0.08	LandPlants
Zm00001e035667_P001	No alias	no hits & (original description: none)	0.06	LandPlants
AMTR_s00045p00058330	evm_27.TU.AmTr_v1...	No description available	0.04	SeedPlants
Gb_04833	No alias	no hits & (original description: none)	0.01	SeedPlants
Gb_15673	No alias	no hits & (original description: none)	0.02	SeedPlants
Gb_15674	No alias	no hits & (original description: none)	0.02	SeedPlants
LOC_Os07g44410.1	No alias	no hits & (original description: none)	0.02	SeedPlants
Solyc06g008620.1.1	No alias	no hits & (original description: none)	0.06	SeedPlants
Zm00001e035667_P001	No alias	no hits & (original description: none)	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006089	lactate metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009438	methylglyoxal metabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	RCA	Interproscan
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	RCA	Interproscan
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042182	ketone catabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046185	aldehyde catabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051596	methylglyoxal catabolic process	None	Extended
BP	GO:0061727	methylglyoxal catabolic process to lactate	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011659	PD40	443	473
IPR011659	PD40	487	515
IPR002469	Peptidase_S9B_N	8	156

External Links

No external refs found!

AT4G01870

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation