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  5. Len_g21822

Len_g21822 (RD21, RD21A)


Aliases : RD21, RD21A

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21822

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00165270 XCP1,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00215790 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 OrthoFinder output from all 47 species
AT5G50260 No alias Cysteine proteinases superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g11955 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aop_g64623 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cba_g36626 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01021223001 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_136g0010 No alias KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.02 OrthoFinder output from all 47 species
Pnu_g07914 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017739 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g34632 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc04g078540.4.1 Solyc04g078540 Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g14706 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e029667_P001 XCP2, Zm00001e029667 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
Zm00001e036416_P001 SAG12, Zm00001e036416 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 OrthoFinder output from all 47 species
Zm00001e036418_P001 SAG12, Zm00001e036418 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e036419_P001 SAG12, Zm00001e036419 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e036420_P001 SAG12, Zm00001e036420 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e039782_P001 Zm00001e039782 Fruit bromelain OS=Ananas comosus (sp|o23791|brom1_anaco... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 47 106
IPR000668 Peptidase_C1A_C 144 362
IPR000118 Granulin 424 471
No external refs found!