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  5. Len_g21789

Len_g21789


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21789
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Als_g30198 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046895 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g78297 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g26213 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
LOC_Os04g47890.1 LOC_Os04g47890 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g59713 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g05331 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433112g0010 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_52379g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g03482 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo149357 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc05g055940.3.1 PHL1, Solyc05g055940 PHR1 transcription factor involved in proline synthesis... 0.03 OrthoFinder output from all 47 species
Solyc10g076460.2.1 Solyc10g076460 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 144 191
IPR001005 SANT/Myb 45 94
No external refs found!