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  5. Smo123864

Smo123864 (PACid_15404124)


Aliases : PACid_15404124

Description : 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX HAWAIIAN SKIRT (HWS) FUNCTIONS IN: ubiquitin-protein ligase activity INVOLVED IN: organ development LOCATED IN: cellular_component unknown EXPRESSED IN: 25 plant structures EXPRESSED DURING: 15 growth stages CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), F-box associated interaction domain (InterPro:IPR017451) BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G15710.1). & (loc_os01g47050.1 : 317.0


Gene families : OG_01_0005441 (Gene family) Phylogenetic Tree(s): OG0005441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo123864
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Zm00001d043989 GRMZM2G382632 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 60
No external refs found!