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  5. Len_g21609

Len_g21609 (TIC55-IV, ACD1-LIKE, PTC52)


Aliases : TIC55-IV, ACD1-LIKE, PTC52

Description : not classified & original description: none


Gene families : OG0000770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21609
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00127460 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.03 OrthoFinder output from all 47 species
AT4G25650 TIC55-IV,... ACD1-like 0.05 OrthoFinder output from all 47 species
Adi_g118091 TIC55-IV,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g21560 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11225 TIC55-IV,... not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g20018 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08348 TIC55-IV,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g07297 TIC55-IV,... not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aop_g08640 TIC55-IV,... not classified & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0065.g035849 TIC55-IV,... not classified & original description: CDS=67-1659 0.06 OrthoFinder output from all 47 species
Ceric.23G050300.1 TIC55-IV,... not classified & original description: pacid=50610352... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000681.17 TIC55-II Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g173450 TIC55-IV,... Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre10.g450550 ACD1, PAO, LLS1 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre11.g476500 TIC55-IV,... Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g05098 TIC55-IV,... not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g15141 TIC55-IV,... not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g06958 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23486 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40218 TIC55-IV,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g06903 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07674 TIC55-IV,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01025446001 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.02 OrthoFinder output from all 47 species
Gb_36694 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.06 OrthoFinder output from all 47 species
LOC_Os03g05310.1 ACD1, PAO, LLS1,... pheophorbide a oxygenase (PAO) 0.02 OrthoFinder output from all 47 species
LOC_Os03g59120.1 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.05 OrthoFinder output from all 47 species
Lfl_g06032 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g25027 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32038 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436082g0010 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.08 OrthoFinder output from all 47 species
Mp6g13750.1 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.03 OrthoFinder output from all 47 species
Msp_g16050 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03610 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11029 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04262 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09573 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g62298 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Pnu_g07246 TIC55-IV,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g41576 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016507 TIC55-IV,... not classified & original description: CDS=60-1520 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020460 TIC55-IV,... not classified & original description: CDS=394-819 0.06 OrthoFinder output from all 47 species
Sam_g39242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo130316 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.08 OrthoFinder output from all 47 species
Solyc04g040160.4.1 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.05 OrthoFinder output from all 47 species
Spa_g15132 TIC55-IV,... not classified & original description: none 0.12 OrthoFinder output from all 47 species
Spa_g19191 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08240 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08591 TIC55-IV,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e006067_P001 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013626 PaO 319 412
IPR017941 Rieske_2Fe-2S 113 195
No external refs found!