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  5. Len_g21498

Len_g21498


Description : auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex & original description: none


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21498
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Aob_g23783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03524 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
MA_402811g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g05825 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Pnu_g13501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035554_P001 Zm00001e035554 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 159
IPR000306 Znf_FYVE 330 395
IPR007461 Ysc84_actin-binding 512 637
No external refs found!