AT4G01037 (WTF1, AtWTF1)


Aliases : WTF1, AtWTF1

Description : Ubiquitin carboxyl-terminal hydrolase family protein


Gene families : OG_01_0001104 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001104_tree ,
OG_02_0001147 (LandPlants) Phylogenetic Tree(s): OG_02_0001147_tree ,
OG_03_0002903 (SeedPlants) Phylogenetic Tree(s): OG_03_0002903_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01037
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.08 Archaeplastida
Gb_07993 No alias WTF1 plastidial RNA basal splicing factor 0.04 Archaeplastida
Gb_34809 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida
MA_158434g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida
Mp3g04080.1 No alias WTF1 plastidial RNA basal splicing factor 0.11 Archaeplastida
Pp3c18_21300V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.14 Archaeplastida
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.03 Archaeplastida
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.09 Archaeplastida
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.06 LandPlants
GSVIVT01027077001 No alias RNA processing.organelle machineries.RNA... 0.15 LandPlants
Gb_07993 No alias WTF1 plastidial RNA basal splicing factor 0.02 LandPlants
Gb_34809 No alias WTF1 plastidial RNA basal splicing factor 0.05 LandPlants
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.06 LandPlants
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.06 LandPlants
MA_158434g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 LandPlants
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.06 LandPlants
Mp3g04080.1 No alias WTF1 plastidial RNA basal splicing factor 0.1 LandPlants
Pp3c18_21300V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.14 LandPlants
Smo438174 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.02 LandPlants
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.02 LandPlants
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.1 LandPlants
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.06 SeedPlants
GSVIVT01027077001 No alias RNA processing.organelle machineries.RNA... 0.16 SeedPlants
Gb_34809 No alias WTF1 plastidial RNA basal splicing factor 0.05 SeedPlants
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.05 SeedPlants
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.06 SeedPlants
MA_158434g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 SeedPlants
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.05 SeedPlants
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.02 SeedPlants
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.09 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021099 PORR_domain 80 408
No external refs found!