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  5. Len_g21153

Len_g21153 (DML1, ROS1)


Aliases : DML1, ROS1

Description : methylcytosine-specific DNA glycosylase *(ROS1) & original description: none


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21153

Target Alias Description ECC score Gene Family Method Actions
AT2G36490 DML1, ROS1 demeter-like 1 0.03 OrthoFinder output from all 47 species
Aop_g18309 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01034713001 DME DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
LOC_Os02g29380.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g37350.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.04 OrthoFinder output from all 47 species
Sam_g25994 No alias methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Spa_g14115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17790 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.05 OrthoFinder output from all 47 species
Tin_g13462 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR028925 RRM_DME 1678 1778
No external refs found!