Smo122902 (PACid_15401943)


Aliases : PACid_15401943

Description : 34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 6 (PDR6) FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances LOCATED IN: plasma membrane EXPRESSED IN: 24 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525) BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 197.0


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo122902
Cluster HCCA cluster: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.02 Gene family
GSVIVT01017185001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017187001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017196001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01017337001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01035786001 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os09g16449 Os09g0333500 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_949447g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
Smo115821 PACid_15402703 No description available 0.02 Gene family
Smo133564 PACid_15409124 No description available 0.02 Gene family
Smo412699 PACid_15413246 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo441722 PACid_15410157 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g019620.2.1 Solyc12g019620.2 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d009037 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d019951 GRMZM2G012465,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d043598 GRMZM2G000614 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013525 ABC_2_trans 3 154
No external refs found!