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  5. Len_g21011

Len_g21011


Description : cation exchanger *(NCL/EF-CAX) & original description: none


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21011
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Aob_g14151 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69318 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.25G007100.1 Ceric.25G007100 cation exchanger *(NCL/EF-CAX) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g23860 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.07 OrthoFinder output from all 47 species
Mp3g19130.1 No alias cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Ore_g17929 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17398 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Smo177778 No alias Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder output from all 47 species
Spa_g23101 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01132 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 627 767
IPR002048 EF_hand_dom 488 551
No external refs found!