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  5. Len_g20879

Len_g20879


Description : not classified & original description: none


Gene families : OG0001164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20879

Target Alias Description ECC score Gene Family Method Actions
AT4G27430 CIP7 COP1-interacting protein 7 0.03 OrthoFinder output from all 47 species
Adi_g036565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07334 CIP7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28851 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29401 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene25806.t1 Aspi01Gene25806 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043348 No alias not classified & original description: CDS=557-5053 0.03 OrthoFinder output from all 47 species
Dac_g08946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g26440.1 LOC_Os07g26440 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g20180.1 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g03335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g090270.3.1 Solyc09g090270 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g09188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006451_P001 Zm00001e006451 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!