Len_g20768

Description : regulatory GTPase (NUG2) of LSU processome & original description: none

Gene families : OG0005924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005924_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g20768

Target	Alias	Description	ECC score	Gene Family Method
AT1G52980	No alias	GTP-binding family protein	0.02	OrthoFinder output from all 47 species
Ala_g03706	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Aop_g12078	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Ceric.29G055900.1	Ceric.29G055900	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.42	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre07.g340050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Dac_g17916	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
LOC_Os03g22890.2	LOC_Os03g22890	NUG2 LSU processome regulatory GTPase	0.02	OrthoFinder output from all 47 species
Lfl_g13104	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.05	OrthoFinder output from all 47 species
Mp2g16460.1	No alias	NUG2 LSU processome regulatory GTPase	0.03	OrthoFinder output from all 47 species
Sam_g15343	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012971	NOG2_N_dom	43	169
IPR006073	GTP-bd	311	380

External Links

No external refs found!