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  5. Len_g20736

Len_g20736


Description : not classified & original description: none


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20736

Target Alias Description ECC score Gene Family Method Actions
AT5G66560 No alias Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
Aop_g08295 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ceric.07G064900.1 Ceric.07G064900 substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Lfl_g06649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430653g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
MA_45208g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species
Pnu_g17535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009652 No alias not classified & original description: CDS=136-2424 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024958 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Sam_g37320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g066730.2.1 Solyc11g066730 BTB/POZ domain-containing protein At3g44820... 0.02 OrthoFinder output from all 47 species
Spa_g39042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011959_P001 Zm00001e011959 BTB/POZ domain-containing protein At5g66560... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 238 511
No external refs found!