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  5. Len_g20718

Len_g20718 (SRO3)


Aliases : SRO3

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20718
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00198960 SRO2,... Probable inactive poly [ADP-ribose] polymerase SRO2... 0.03 OrthoFinder output from all 47 species
Ala_g14528 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Als_g44313 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16896 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g13526 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51173.t2 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G050900.1 SRO1, Ceric.35G050900 organellar-signalling mediator *(RCD1) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g02762 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12820.1 SRO2, LOC_Os03g12820 Probable inactive poly [ADP-ribose] polymerase SRO2... 0.02 OrthoFinder output from all 47 species
Msp_g03984 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g114360.4.1 SRO5, Solyc03g114360 Probable inactive poly [ADP-ribose] polymerase SRO5... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004170 WWE-dom 83 138
IPR012317 Poly(ADP-ribose)pol_cat_dom 247 358
IPR022003 RST 500 562
No external refs found!