Len_g20533


Description : not classified & original description: none


Gene families : OG0006565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006565_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20533
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00130820 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
Adi_g019161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09470 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g17473 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g04379 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04847 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g22395 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.01G127300.1 Ceric.01G127300 not classified & original description: pacid=50590744... 0.04 OrthoFinder output from all 47 species
Dac_g01712 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019542001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g24390.1 LOC_Os08g24390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g18015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g02030.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g25333 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g03094 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0201.g025610 No alias not classified & original description: CDS=95-1936 0.02 OrthoFinder output from all 47 species
Sam_g10638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo73285 No alias No description available 0.04 OrthoFinder output from all 47 species
Spa_g10129 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g06907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002845_P002 Zm00001e002845 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!