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  5. Len_g20489

Len_g20489 (emb2746)


Aliases : emb2746

Description : exoribonuclease *(RNase J) & original description: none


Gene families : OG0003970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20489

Target Alias Description ECC score Gene Family Method Actions
Ala_g32457 emb2746 exoribonuclease *(RNase J) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22857 emb2746 exoribonuclease *(RNase J) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437259g0030 emb2746 no description available(sp|q84w56|rnj_arath : 164.0) 0.03 OrthoFinder output from all 47 species
Sam_g45527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR011108 RMMBL 457 513
IPR044822 Myb_DNA-bind_4 880 970
IPR001279 Metallo-B-lactamas 126 263
No external refs found!