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  5. AMTR_s00011p00255760

AMTR_s00011p00255760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.172

Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.NCED carotenoid cleavage dioxygenase


Gene families : OG_01_0000267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000267_tree ,
OG_02_0000908 (LandPlants) Phylogenetic Tree(s): OG_02_0000908_tree ,
OG_03_0003873 (SeedPlants) Phylogenetic Tree(s): OG_03_0003873_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00255760
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001128.6 No alias No description available 0.02 Archaeplastida
GSVIVT01036862001 No alias Probable carotenoid cleavage dioxygenase 4,... 0.04 Archaeplastida
Gb_04986 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
MA_10425950g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
MA_10425950g0020 No alias Probable carotenoid cleavage dioxygenase 4,... 0.02 Archaeplastida
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 Archaeplastida
Smo165469 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Smo272067 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
Smo80651 No alias Secondary metabolism.terpenoids.terpenoid... 0.04 Archaeplastida
Zm00001e012402_P001 No alias neoxanthin cleavage protein 0.02 Archaeplastida
Zm00001e015574_P001 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 LandPlants
MA_10425950g0020 No alias Probable carotenoid cleavage dioxygenase 4,... 0.02 LandPlants
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.05 LandPlants
Smo80651 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 LandPlants
Zm00001e015574_P001 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 LandPlants
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 SeedPlants
MA_10425950g0020 No alias Probable carotenoid cleavage dioxygenase 4,... 0.02 SeedPlants
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 SeedPlants
Zm00001e015574_P001 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 127 594
No external refs found!