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  5. Len_g20213

Len_g20213


Description : MRM2-type rRNA methyltransferase & original description: none


Gene families : OG0004018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20213

Target Alias Description ECC score Gene Family Method Actions
AT4G25730 No alias FtsJ-like methyltransferase family protein 0.02 OrthoFinder output from all 47 species
Aev_g01504 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66001 No alias MRM2-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.33G005200.1 Ceric.33G005200 MRM2-type rRNA methyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01023801001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_158214g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g14990.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06497 No alias MRM2-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
BP GO:0032259 methylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024576 rRNA_MeTfrase_Spb1_DUF3381 236 390
IPR012920 rRNA_MeTfrase_SPB1-like_C 610 800
IPR002877 RNA_MeTrfase_FtsJ_dom 24 203
No external refs found!