AT3G63520 (ATCCD1, CCD1, NCED1, ATNCED1)

Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : carotenoid cleavage dioxygenase 1

Gene families : OG_01_0000267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000267_tree ,
OG_02_0003817 (LandPlants) Phylogenetic Tree(s): OG_02_0003817_tree ,
OG_03_0004867 (SeedPlants) Phylogenetic Tree(s): OG_03_0004867_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G63520
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00253450	evm_27.TU.AmTr_v1...	Secondary metabolism.terpenoids.terpenoid...	0.04	Archaeplastida
Cpa\|evm.model.tig00001128.6	No alias	No description available	0.02	Archaeplastida
GSVIVT01032103001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.05	Archaeplastida
LOC_Os12g44310.1	No alias	carotenoid cleavage dioxygenase (CCD1)	0.04	Archaeplastida
MA_10435932g0010	No alias	carotenoid cleavage dioxygenase (CCD1)	0.02	Archaeplastida
MA_906445g0010	No alias	No annotation	0.05	Archaeplastida
Pp3c21_12920V3.1	No alias	carotenoid cleavage dioxygenase 1	0.02	Archaeplastida
Pp3c22_6380V3.1	No alias	carotenoid cleavage dioxygenase 1	0.05	Archaeplastida
Smo165469	No alias	Secondary metabolism.terpenoids.terpenoid...	0.03	Archaeplastida
Smo272067	No alias	Secondary metabolism.terpenoids.terpenoid...	0.05	Archaeplastida
Smo91529	No alias	No description available	0.02	Archaeplastida
Solyc01g087260.4.1	No alias	No annotation	0.02	Archaeplastida
Zm00001e038960_P002	No alias	carotenoid cleavage dioxygenase (CCD1)	0.03	Archaeplastida
AMTR_s00022p00253450	evm_27.TU.AmTr_v1...	Secondary metabolism.terpenoids.terpenoid...	0.04	LandPlants
GSVIVT01032103001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.02	LandPlants
LOC_Os12g44310.1	No alias	carotenoid cleavage dioxygenase (CCD1)	0.04	LandPlants
MA_906445g0010	No alias	No annotation	0.05	LandPlants
Mp7g12990.1	No alias	carotenoid cleavage dioxygenase (CCD1)	0.01	LandPlants
Pp3c21_12920V3.1	No alias	carotenoid cleavage dioxygenase 1	0.02	LandPlants
Pp3c22_6380V3.1	No alias	carotenoid cleavage dioxygenase 1	0.05	LandPlants
Smo165469	No alias	Secondary metabolism.terpenoids.terpenoid...	0.02	LandPlants
Smo272067	No alias	Secondary metabolism.terpenoids.terpenoid...	0.04	LandPlants
Zm00001e038960_P002	No alias	carotenoid cleavage dioxygenase (CCD1)	0.03	LandPlants
AMTR_s00022p00253450	evm_27.TU.AmTr_v1...	Secondary metabolism.terpenoids.terpenoid...	0.04	SeedPlants
GSVIVT01032103001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.02	SeedPlants
LOC_Os12g44310.1	No alias	carotenoid cleavage dioxygenase (CCD1)	0.04	SeedPlants
Zm00001e038960_P002	No alias	carotenoid cleavage dioxygenase (CCD1)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006636	unsaturated fatty acid biosynthetic process	RCA	Interproscan
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006655	phosphatidylglycerol biosynthetic process	RCA	Interproscan
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008300	isoprenoid catabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IEP	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010304	PSII associated light-harvesting complex II catabolic process	RCA	Interproscan
MF	GO:0010436	carotenoid dioxygenase activity	None	Extended
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015995	chlorophyll biosynthetic process	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016110	tetraterpenoid catabolic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016115	terpenoid catabolic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	RCA	Interproscan
BP	GO:0016118	carotenoid catabolic process	IDA	Interproscan
BP	GO:0016119	carotene metabolic process	None	Extended
BP	GO:0016121	carotene catabolic process	IMP	Interproscan
BP	GO:0016122	xanthophyll metabolic process	None	Extended
BP	GO:0016124	xanthophyll catabolic process	IMP	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0033559	unsaturated fatty acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042214	terpene metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	RCA	Interproscan
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044257	cellular protein catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0045017	glycerolipid biosynthetic process	None	Extended
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IDA	Interproscan
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046247	terpene catabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046471	phosphatidylglycerol metabolic process	None	Extended
BP	GO:0046474	glycerophospholipid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120253	hydrocarbon catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	52	527

External Links

No external refs found!

AT3G63520 (ATCCD1, CCD1, NCED1, ATNCED1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation