Smo121275 (PACid_15416177)


Aliases : PACid_15416177

Description : No description available


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo121275
Cluster HCCA cluster: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.05 Gene family
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT1G77950 AGL67 AGAMOUS-like 67 0.02 Gene family
AT2G45650 AGL6 AGAMOUS-like 6 0.02 Gene family
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.03 Gene family
AT3G30260 AGL79 AGAMOUS-like 79 0.03 Gene family
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
GSVIVT01008560001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01021534001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01022182001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01025945001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01027577001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01033253001 No alias No description available 0.02 Gene family
GSVIVT01035477001 No alias 33.99 development.unspecified Encodes a member of the... 0.04 Gene family
LOC_Os01g10504 Os01g0201700 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os02g45770 Os02g0682200 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
LOC_Os03g54170 Os03g0753100 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
LOC_Os04g23910 Os04g0304400 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os04g49150 Os04g0580700 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os06g06750 Os06g0162800 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os06g11970 Os06g0223300 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os06g23950 Os06g0347700 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os07g01820 Os07g0108900 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
LOC_Os09g32948 Os09g0507200 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
MA_10289256g0010 No alias No description available 0.02 Gene family
MA_13933g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.01 Gene family
MA_175522g0010 No alias No description available 0.03 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
MA_25342g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_6042439g0010 No alias No description available 0.02 Gene family
Solyc01g106710.1.1 Solyc01g106710.1 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Solyc02g065730.2.1 Solyc02g065730.2 33.99 development.unspecified MADS box gene negatively... 0.02 Gene family
Solyc04g005320.3.1 Solyc04g005320.3 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Solyc05g012020.3.1 Solyc05g012020.3 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Solyc06g069430.3.1 Solyc06g069430.3 33.99 development.unspecified MADS box gene negatively... 0.04 Gene family
Zm00001d006094 GRMZM2G129034 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d017932 GRMZM2G044408,... 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d021057 GRMZM2G097059 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d023955 GRMZM2G010669 33.99 development.unspecified One of two genes (SHP1 and... 0.02 Gene family
Zm00001d027957 GRMZM2G059102 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
Zm00001d031591 GRMZM2G148220 27.3.24 RNA.regulation of transcription.MADS box... 0.01 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d037737 GRMZM2G052890 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d039913 GRMZM2G320549 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d048082 GRMZM2G102161 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
Zm00001d050897 GRMZM2G055782,... 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d051465 GRMZM2G003514 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!