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  5. Len_g19716

Len_g19716


Description : not classified & original description: none


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19716

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g08825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19107 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g21152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22752.t1 Aspi01Gene22752 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01009215001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g36473 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10427585g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434775g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_228529g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87408g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13580.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g20220.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp7g11130.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g08194 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc11g011270.1.1 Solyc11g011270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011290.3.1 Solyc11g011290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04774 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 361 421
IPR010325 Rhamnogal_lyase 10 205
IPR029411 RG-lyase_III 444 599
No external refs found!