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  5. Smo121188

Smo121188 (PACid_15415485)


Aliases : PACid_15415485

Description : 35.2 not assigned.unknown A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 2775 (EMB2775) FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding INVOLVED IN: embryo development ending in seed dormancy LOCATED IN: nucleus EXPRESSED IN: 23 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp-loader complex, subunit E, C-terminal (InterPro:IPR019483), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921) BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA


Gene families : OG_01_0003094 (Gene family) Phylogenetic Tree(s): OG0003094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo121188
Cluster HCCA cluster: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.48 No alias 35.2 not assigned.unknown A locus involved in... 0.01 Gene family
Cre16.g679950 No alias 35.2 not assigned.unknown A locus involved in... 0.02 Gene family
MA_168293g0010 No alias 35.2 not assigned.unknown A locus involved in... 0.02 Gene family
Zm00001d013095 GRMZM5G897818 35.2 not assigned.unknown A locus involved in... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!