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  5. Len_g19668

Len_g19668


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19668

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g012562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074054 HEN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29218 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g62599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.04 OrthoFinder output from all 47 species
Ceric.24G065400.1 Ceric.24G065400 not classified & original description: pacid=50629874... 0.04 OrthoFinder output from all 47 species
Ceric.32G028300.1 Ceric.32G028300 not classified & original description: pacid=50598029... 0.05 OrthoFinder output from all 47 species
Ceric.32G061200.1 Ceric.32G061200 not classified & original description: pacid=50597564... 0.04 OrthoFinder output from all 47 species
Dcu_g01662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03724 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Lfl_g10062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g04880.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Msp_g04932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41373 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020404 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007810.3.1 Solyc05g007810 RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.05 OrthoFinder output from all 47 species
Spa_g05211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051301 cell division IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 413 476
IPR004088 KH_dom_type_1 41 94
IPR004088 KH_dom_type_1 331 381
IPR004088 KH_dom_type_1 601 663
IPR004088 KH_dom_type_1 174 242
No external refs found!