AT3G63130 (RANGAP1, ATRANGAP1)


Aliases : RANGAP1, ATRANGAP1

Description : RAN GTPase activating protein 1


Gene families : OG_01_0002548 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002548_tree ,
OG_02_0002456 (LandPlants) Phylogenetic Tree(s): OG_02_0002456_tree ,
OG_03_0002558 (SeedPlants) Phylogenetic Tree(s): OG_03_0002558_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G63130
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011081001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_10430396g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83167g0010 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.06 Archaeplastida
Pp3c7_9140V3.1 No alias RAN GTPase activating protein 1 0.1 Archaeplastida
Solyc01g079680.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.05 Archaeplastida
Solyc09g065190.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.04 Archaeplastida
GSVIVT01011081001 No alias RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.03 LandPlants
LOC_Os05g46560.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.02 LandPlants
MA_10430396g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_83167g0010 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.06 LandPlants
Pp3c7_9140V3.1 No alias RAN GTPase activating protein 1 0.07 LandPlants
Solyc01g079680.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.04 LandPlants
Solyc09g065190.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.04 LandPlants
LOC_Os05g46560.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.02 SeedPlants
MA_10430396g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_83167g0010 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.06 SeedPlants
Solyc01g079680.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.04 SeedPlants
Solyc09g065190.3.1 No alias GTPase activating component Ran-GAP of nucleocytoplasmic... 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000280 nuclear division RCA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005635 nuclear envelope IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006346 DNA methylation-dependent heterochromatin assembly RCA Interproscan
BP GO:0006406 mRNA export from nucleus RCA Interproscan
BP GO:0006606 protein import into nucleus RCA Interproscan
BP GO:0006606 protein import into nucleus TAS Interproscan
BP GO:0006913 nucleocytoplasmic transport RCA Interproscan
BP GO:0007000 nucleolus organization RCA Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
CC GO:0009504 cell plate IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0031048 heterochromatin assembly by small RNA RCA Interproscan
CC GO:0032153 cell division site IDA Interproscan
BP GO:0048527 lateral root development RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025265 WPP_dom 14 108
IPR001611 Leu-rich_rpt 405 426
IPR001611 Leu-rich_rpt 349 370
IPR001611 Leu-rich_rpt 209 230
IPR001611 Leu-rich_rpt 319 342
No external refs found!