Len_g19585


Description : not classified & original description: none


Gene families : OG0005320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005320_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19585

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00097p00038600 evm_27.TU.AmTr_v1... Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ceric.33G026500.1 Ceric.33G026500 not classified & original description: pacid=50607555... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.41 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021128.8 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g15118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025731001 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os07g34950.1 LOC_Os07g34950 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_10158783g0010 No alias Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g24996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008701_P001 Zm00001e008701 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR007621 TPM_dom 102 224
No external refs found!