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  5. Len_g19578

Len_g19578 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0011810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011810_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19578
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Als_g19269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36700 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013669 REME1 not classified & original description: CDS=1-1467 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 324 370
IPR002885 Pentatricopeptide_repeat 88 136
IPR002885 Pentatricopeptide_repeat 163 183
IPR002885 Pentatricopeptide_repeat 398 423
IPR002885 Pentatricopeptide_repeat 191 221
IPR002885 Pentatricopeptide_repeat 299 321
No external refs found!