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  5. Len_g19415

Len_g19415 (TRFL2)


Aliases : TRFL2

Description : telomeric dsDNA-binding protein & original description: none


Gene families : OG0001380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19415
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT3G46590 TRP2, ATTRP2, TRFL1 TRF-like 1 0.03 OrthoFinder output from all 47 species
Aop_g35743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01693 TRFL2 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07861 TRFL9, ATTBP2 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10303 TRFL2 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Msp_g15747 TRFL2 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06278 TRFL2 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07712 TRFL2 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06107 TRFL2 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!