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  5. Len_g19235

Len_g19235


Description : component *(PsbX) of PS-II complex & original description: none


Gene families : OG0002177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00218080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
AT2G06520 PSBX photosystem II subunit X 0.05 OrthoFinder output from all 47 species
Adi_g021165 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g024522 PSBX component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Adi_g024523 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g048424 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g41627 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g45505 PSBX component *(PsbX) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g10239 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g27184 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28828 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48977 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55991 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g15623 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene09132.t1 PSBX, Aspi01Gene09132 component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59149.t1 PSBX, Aspi01Gene59149 component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g05544 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22045 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.04G046600.1 PSBX, Ceric.04G046600 component *(PsbX) of PS-II complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G082200.1 PSBX, Ceric.04G082200 component *(PsbX) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G060900.1 PSBX, Ceric.24G060900 component *(PsbX) of PS-II complex & original... 0.08 OrthoFinder output from all 47 species
Dcu_g31006 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21199 PSBX component *(PsbX) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g22238 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23441 PSBX component *(PsbX) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01035449001 PSBX Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.1 OrthoFinder output from all 47 species
Gb_07296 PSBX component PsbX of PS-II complex 0.06 OrthoFinder output from all 47 species
LOC_Os03g22370.1 PSBX, LOC_Os03g22370 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g47640.1 PSBX, LOC_Os07g47640 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species
Lfl_g15877 No alias component *(PsbX) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
MA_464043g0010 PSBX component PsbX of PS-II complex 0.03 OrthoFinder output from all 47 species
MA_59693g0010 PSBX component PsbX of PS-II complex 0.07 OrthoFinder output from all 47 species
Mp6g21460.1 PSBX component PsbX of PS-II complex 0.12 OrthoFinder output from all 47 species
Msp_g07031 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23651 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48365 PSBX component *(PsbX) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g06188 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g30737 No alias component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04809 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002436 PSBX component *(PsbX) of PS-II complex & original... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023606 PSBX component *(PsbX) of PS-II complex & original... 0.07 OrthoFinder output from all 47 species
Sam_g04554 No alias component *(PsbX) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g28404 No alias component *(PsbX) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Solyc05g025600.1.1 PSBX, Solyc05g025600 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species
Spa_g02683 PSBX component *(PsbX) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29201 PSBX component *(PsbX) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g35692 PSBX component *(PsbX) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16593 PSBX component *(PsbX) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e025856_P001 PSBX, Zm00001e025856 component PsbX of PS-II complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 133 169
No external refs found!