AT3G62770 (AtATG18a)


Aliases : AtATG18a

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001600 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001600_tree ,
OG_02_0001405 (LandPlants) Phylogenetic Tree(s): OG_02_0001405_tree ,
OG_03_0001795 (SeedPlants) Phylogenetic Tree(s): OG_03_0001795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62770
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida
Pp3c17_4970V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Archaeplastida
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Pp3c17_4970V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.03 LandPlants
Pp3c6_26220V3.1 No alias homolog of yeast autophagy 18C 0.02 LandPlants
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Zm00001e016794_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0006914 autophagy IMP Interproscan
BP GO:0006914 autophagy RCA Interproscan
BP GO:0006970 response to osmotic stress IEP Interproscan
BP GO:0006979 response to oxidative stress IEP Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009414 response to water deprivation IEP Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0010150 leaf senescence IMP Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
CC GO:0031090 organelle membrane IBA Interproscan
BP GO:0042594 response to starvation IMP Interproscan
BP GO:0042594 response to starvation IEP Interproscan
BP GO:0044265 cellular macromolecule catabolic process RCA Interproscan
BP GO:0048102 autophagic cell death IMP Interproscan
BP GO:0050832 defense response to fungus IEP Interproscan
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IBA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 295 320
No external refs found!