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Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: none
Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G55040 | No alias | DNA-binding bromodomain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g109942 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g08601 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G005700.1 | Ceric.20G005700 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G070400.1 | Ceric.29G070400 | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.150 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g06181 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g30103 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_27356 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g03870.1 | LOC_Os03g03870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428440g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g15940.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g41800 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g15318 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11339 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g41680 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g064700.4.1 | Solyc07g064700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001487 | Bromodomain | 572 | 652 |
| No external refs found! |