AT3G62690 (ATL5)


Aliases : ATL5

Description : AtL5


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0000056 (SeedPlants) Phylogenetic Tree(s): OG_03_0000056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62690
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G01880 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01007975001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01036593001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20700 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g29600.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
MA_189618g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_201391g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
MA_222729g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_51630g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8362328g0010 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.03 Archaeplastida
MA_92848g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo137213 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc01g105610.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g049030.4.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g094385.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002430_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015796_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e027277_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031105_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT5G01880 No alias RING/U-box superfamily protein 0.05 LandPlants
AT5G17600 No alias RING/U-box superfamily protein 0.06 LandPlants
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Gb_14778 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.05 LandPlants
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_189618g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_222729g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_2679g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_373963g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_43543g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_51630g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_5319g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_92848g0010 No alias RING-H2-class E3 ligase 0.04 LandPlants
MA_96368g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Solyc06g007230.2.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc06g049030.4.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e002430_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e017960_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e030136_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 LandPlants
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Gb_14778 No alias RING-H2-class E3 ligase 0.03 SeedPlants
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.02 SeedPlants
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.03 SeedPlants
MA_308999g0020 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc06g007230.2.1 No alias RING-H2-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
CC GO:0016020 membrane ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 112 155
No external refs found!