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  5. Len_g19098

Len_g19098


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19098

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
Ala_g36226 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22030 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01829.t1 Aspi01Gene01829 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48921.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08329 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Gb_37561 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os02g01380.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os03g02240.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Lfl_g04981 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_331768g0010 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Mp8g08100.1 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Ore_g32332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16876 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g34685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo85122 No alias Trihelix transcription factor GT-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g005380.2.1 Solyc11g005380 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Spa_g40341 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51431 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004364_P002 Zm00001e004364 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Zm00001e012540_P001 Zm00001e012540 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 474 561
IPR044822 Myb_DNA-bind_4 197 268
No external refs found!