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  5. Len_g18772

Len_g18772 (ATEXPA1, EXP1,...)


Aliases : ATEXPA1, EXP1, AT-EXP1, EXPA1, ATEXP1, ATHEXP ALPHA 1.2

Description : alpha-class expansin & original description: none


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18772

Target Alias Description ECC score Gene Family Method Actions
Aev_g16352 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17360 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17828 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67734 No alias alpha-class expansin & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g05196 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17737 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Gb_33857 EXPA6, ATEXP6,... Expansin-A6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g16880 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13913 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36048 No alias alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g20454 No alias alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27814 No alias alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54048 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019976 No alias alpha-class expansin & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019979 No alias alpha-class expansin & original description: CDS=1-759 0.04 OrthoFinder output from all 47 species
Spa_g07260 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004712_P001 Zm00001e004712 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 178 225
IPR009009 RlpA-like_DPBB 79 167
No external refs found!