AT3G62170 (VGDH2)

Aliases : VGDH2

Description : VANGUARD 1 homolog 2

Gene families : OG_01_0014060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0014060_tree ,
OG_02_0013989 (LandPlants) Phylogenetic Tree(s): OG_02_0013989_tree ,
OG_03_0015163 (SeedPlants) Phylogenetic Tree(s): OG_03_0015163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G62170
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
Solyc06g084620.1.1	No alias	pectin methylesterase	0.06	Archaeplastida
Solyc06g084620.1.1	No alias	pectin methylesterase	0.04	LandPlants
AT2G47050	No alias	Plant invertase/pectin methylesterase inhibitor...	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	None	Extended
CC	GO:0009505	plant-type cell wall	ISS	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030599	pectinesterase activity	ISS	Interproscan
CC	GO:0042995	cell projection	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
CC	GO:0090406	pollen tube	IDA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	278	571
IPR006501	Pectinesterase_inhib_dom	47	193

External Links

No external refs found!