AT3G62120


Description : Class II aaRS and biotin synthetases superfamily protein


Gene families : OG_01_0001642 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001642_tree ,
OG_02_0004605 (LandPlants) Phylogenetic Tree(s): OG_02_0004605_tree ,
OG_03_0004792 (SeedPlants) Phylogenetic Tree(s): OG_03_0004792_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G62120
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00127050 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Cpa|evm.model.tig00021463.3 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
GSVIVT01028250001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
LOC_Os12g25710.1 No alias proline-tRNA ligase 0.06 Archaeplastida
MA_19799g0010 No alias proline-tRNA ligase 0.03 Archaeplastida
MA_451765g0010 No alias No annotation 0.03 Archaeplastida
Mp2g25470.1 No alias proline-tRNA ligase 0.02 Archaeplastida
Pp3c2_3850V3.1 No alias Class II aaRS and biotin synthetases superfamily protein 0.05 Archaeplastida
Smo74713 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida
Solyc06g068320.3.1 No alias proline-tRNA ligase 0.06 Archaeplastida
Zm00001e007170_P001 No alias proline-tRNA ligase 0.03 Archaeplastida
Zm00001e024670_P003 No alias proline-tRNA ligase 0.11 Archaeplastida
AMTR_s00058p00127050 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 LandPlants
GSVIVT01028250001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 LandPlants
LOC_Os12g25710.1 No alias proline-tRNA ligase 0.05 LandPlants
MA_19799g0010 No alias proline-tRNA ligase 0.03 LandPlants
MA_451765g0010 No alias No annotation 0.03 LandPlants
Mp2g25470.1 No alias proline-tRNA ligase 0.02 LandPlants
Pp3c2_3850V3.1 No alias Class II aaRS and biotin synthetases superfamily protein 0.05 LandPlants
Smo74713 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 LandPlants
Solyc06g068320.3.1 No alias proline-tRNA ligase 0.05 LandPlants
Zm00001e007170_P001 No alias proline-tRNA ligase 0.03 LandPlants
Zm00001e024670_P003 No alias proline-tRNA ligase 0.11 LandPlants
AMTR_s00058p00127050 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 SeedPlants
GSVIVT01028250001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 SeedPlants
LOC_Os12g25710.1 No alias proline-tRNA ligase 0.05 SeedPlants
MA_19799g0010 No alias proline-tRNA ligase 0.03 SeedPlants
Solyc06g068320.3.1 No alias proline-tRNA ligase 0.05 SeedPlants
Zm00001e007170_P001 No alias proline-tRNA ligase 0.03 SeedPlants
Zm00001e024670_P003 No alias proline-tRNA ligase 0.11 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity ISS Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 149 315
IPR004154 Anticodon-bd 334 430
IPR016061 Pro-tRNA_ligase_II_C 457 530
No external refs found!