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Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00115350 | RARE1,... | Pentatricopeptide repeat-containing protein At5g13270,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G02980 | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G66520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17771 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g35873 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g54765 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g56368 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07355 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059121 | CRR22 | not classified & original description: CDS=1-2070 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02672 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19060 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19771 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20250 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g34761 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75350 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.01G084700.1 | VAC1, ECB2,... | not classified & original description: pacid=50592179... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G106200.1 | Ceric.04G106200 | not classified & original description: pacid=50630879... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g00755 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30041 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06366 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21480 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g22451 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g31896 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37149 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g43330 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g51775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03965 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04851 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10498 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18063 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23602 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28915 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g36299 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46551 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01017378001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027525001 | LPA66 | Pentatricopeptide repeat-containing protein At4g21065... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08036 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18263 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_19693 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_20571 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_23267 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_25283 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_35599 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40766 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g07979 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06713 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06743 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06746 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07038 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11306 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g23154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g33318 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_82569g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g17454 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g33676 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20613 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g14266 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13334 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g40819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g46650 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g51106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63843 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13844 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18475 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g49012 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002051 | REME1 | not classified & original description: CDS=1-1467 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004510 | No alias | not classified & original description: CDS=121-2523 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0144.g022950 | EMB2261 | not classified & original description: CDS=1-2124 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16013 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g062820.1.1 | Solyc07g062820 | RNA editing factor (SEL1/PDM1) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g013850.1.1 | CRR21, Solyc08g013850 | RNA editing factor (CRR21) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g017370.3.1 | Solyc11g017370 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 407 | 429 |
| IPR002885 | Pentatricopeptide_repeat | 203 | 227 |
| IPR002885 | Pentatricopeptide_repeat | 432 | 479 |
| IPR002885 | Pentatricopeptide_repeat | 229 | 275 |
| IPR002885 | Pentatricopeptide_repeat | 127 | 173 |
| IPR002885 | Pentatricopeptide_repeat | 534 | 581 |
| IPR002885 | Pentatricopeptide_repeat | 331 | 377 |
| No external refs found! |