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  5. Len_g17960

Len_g17960 (SPDS1)


Aliases : SPDS1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: none


Gene families : OG0001566 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g17960

Target Alias Description ECC score Gene Family Method Actions
AT1G23820 SPDS1 spermidine synthase 1 0.02 OrthoFinder output from all 47 species
Adi_g014578 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Ala_g09370 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aop_g11163 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.01 OrthoFinder output from all 47 species
LOC_Os02g15550.2 SPDS3, ATSPDS3,... spermine synthase 0.02 OrthoFinder output from all 47 species
Ppi_g61515 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Solyc06g053510.3.1 SPDS1, Solyc06g053510 Putrescine N-methyltransferase 3 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc08g014310.3.1 SPDS1, Solyc08g014310 Putrescine N-methyltransferase 2 OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e037080_P001 SPDS3, ATSPDS3,... spermine synthase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR035246 Spermidine_synt_N 110 164
No external refs found!