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  5. Len_g17874

Len_g17874 (PSAD-2)


Aliases : PSAD-2

Description : component *(PsaD) of PS-I complex & original description: none


Gene families : OG0005029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g17874

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00041210 PSAD-1,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.05 OrthoFinder output from all 47 species
AT1G03130 PSAD-2 photosystem I subunit D-2 0.04 OrthoFinder output from all 47 species
AT4G02770 PSAD-1 photosystem I subunit D-1 0.06 OrthoFinder output from all 47 species
Aev_g40416 PSAD-2 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08260 PSAD-2 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06974 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12165 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27510.t1 PSAD-1, Aspi01Gene27510 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07831 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.14G082100.1 PSAD-1, Ceric.14G082100 component *(PsaD) of PS-I complex & original... 0.07 OrthoFinder output from all 47 species
Ceric.38G011300.1 PSAD-1, Ceric.38G011300 component *(PsaD) of PS-I complex & original... 0.07 OrthoFinder output from all 47 species
Cre05.g238332 PSAD-1 Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.04 OrthoFinder output from all 47 species
Dac_g16111 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26018 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24887 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g27430 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00340 PSAD-2 component *(PsaD) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01001159001 PSAD-2 Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.04 OrthoFinder output from all 47 species
GSVIVT01017944001 PSAD-1 Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.03 OrthoFinder output from all 47 species
Gb_20120 PSAD-2 component PsaD of PS-I complex 0.04 OrthoFinder output from all 47 species
MA_9169733g0010 PSAD-1 component PsaD of PS-I complex 0.03 OrthoFinder output from all 47 species
Mp5g04200.1 PSAD-1 component PsaD of PS-I complex 0.06 OrthoFinder output from all 47 species
Msp_g25846 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06591 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g07013 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19078 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30439 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010842 PSAD-2 component *(PsaD) of PS-I complex & original... 0.05 OrthoFinder output from all 47 species
Solyc06g054260.1.1 PSAD-2, Solyc06g054260 component PsaD of PS-I complex 0.04 OrthoFinder output from all 47 species
Spa_g10017 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16378 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22425 PSAD-1 component *(PsaD) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011821_P001 PSAD-1, Zm00001e011821 component PsaD of PS-I complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003685 PsaD 65 185
No external refs found!