Len_g17796 (gsl12, ATGSL12)


Aliases : gsl12, ATGSL12

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g17796

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00098420 gsl12, ATGSL12,... Cell wall.callose.callose synthase 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00150590 ATGSL08, ATGSL8,... Cell wall.callose.callose synthase 0.02 OrthoFinder output from all 47 species
AT2G31960 GSL03, ATGSL3, ATGSL03 glucan synthase-like 3 0.06 OrthoFinder output from all 47 species
AT2G36850 ATGSL08, ATGSL8,... glucan synthase-like 8 0.07 OrthoFinder output from all 47 species
AT3G07160 ATGSL10, gsl10, CALS9 glucan synthase-like 10 0.08 OrthoFinder output from all 47 species
AT4G03550 GSL5, PMR4,... glucan synthase-like 5 0.03 OrthoFinder output from all 47 species
AT4G04970 ATGSL01, GSL01,... glucan synthase-like 1 0.04 OrthoFinder output from all 47 species
Adi_g003220 gsl12, ATGSL12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005568 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015404 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024001 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054732 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05019 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14599 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27518 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08918 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08919 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13328 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14712 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13887 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31920 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g37113 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05068.t1 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07801.t3 ATGSL10, gsl10,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11664.t1 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28017.t1 ATGSL10, gsl10,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33955.t1 gsl12, ATGSL12,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene39808.t2 GLS2, ATGSL02,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68987.t1 gsl12, ATGSL12,... EC_2.4 glycosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0022.g016075 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: CDS=510-6215 0.03 OrthoFinder output from all 47 species
Cba_g07493 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G012300.1 gsl12, ATGSL12,... not classified & original description: pacid=50590327... 0.04 OrthoFinder output from all 47 species
Ceric.03G005500.1 ATGSL10, gsl10,... EC_2.4 glycosyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G079800.1 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description:... 0.06 OrthoFinder output from all 47 species
Cre03.g198200 GSL7, ATGSL07,... Cell wall.callose.callose synthase 0.01 OrthoFinder output from all 47 species
Dac_g17127 GSL5, PMR4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32999 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40022 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19877 GSL06, ATGSL06,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46562 ATGSL08, ATGSL8,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51249 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007560001 ATGSL08, ATGSL8,... Cell wall.callose.callose synthase 0.04 OrthoFinder output from all 47 species
GSVIVT01025370001 ATGSL10, gsl10, CALS9 Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
GSVIVT01025372001 ATGSL10, gsl10, CALS9 Callose synthase 9 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_22029 ATGSL08, ATGSL8,... callose synthase 0.03 OrthoFinder output from all 47 species
Gb_32715 GLS2, ATGSL02, CALS5 callose synthase 0.03 OrthoFinder output from all 47 species
LOC_Os01g55040.1 GSL5, PMR4,... callose synthase 0.02 OrthoFinder output from all 47 species
LOC_Os02g58560.1 gsl12, ATGSL12,... callose synthase 0.03 OrthoFinder output from all 47 species
LOC_Os06g02260.1 ATGSL08, ATGSL8,... callose synthase 0.02 OrthoFinder output from all 47 species
Lfl_g06768 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12923 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g34694 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
MA_101796g0010 gsl12, ATGSL12 Callose synthase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10426192g0010 GSL03, ATGSL3, ATGSL03 Callose synthase 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10428413g0020 GLS2, ATGSL02, CALS5 Callose synthase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10430560g0010 ATGSL08, ATGSL8,... Callose synthase 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432652g0010 ATGSL08, ATGSL8,... callose synthase 0.04 OrthoFinder output from all 47 species
MA_2744g0020 gsl12, ATGSL12 Callose synthase 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_2744g0030 gsl12, ATGSL12 Callose synthase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_546342g0010 ATGSL10, gsl10, CALS9 callose synthase 0.06 OrthoFinder output from all 47 species
MA_6658221g0010 GSL5, PMR4,... Callose synthase 12 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g13536 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06339 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09605 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10967 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19407 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60709 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00429 GSL5, PMR4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13350 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14151 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006151 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: CDS=122-5707 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020967 GLS2, ATGSL02, CALS5 EC_2.4 glycosyltransferase & original description: CDS=2793-4778 0.03 OrthoFinder output from all 47 species
Sam_g39583 No alias EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50509 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Smo177798 GLS2, ATGSL02, CALS5 Cell wall.callose.callose synthase 0.03 OrthoFinder output from all 47 species
Smo267830 GLS2, ATGSL02, CALS5 Cell wall.callose.callose synthase 0.02 OrthoFinder output from all 47 species
Smo439692 GSL5, PMR4,... Cell wall.callose.callose synthase 0.02 OrthoFinder output from all 47 species
Solyc01g006350.4.1 ATGSL10, gsl10,... callose synthase 0.04 OrthoFinder output from all 47 species
Solyc01g006360.4.1 ATGSL10, gsl10,... Callose synthase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g26127 ATGSL10, gsl10, CALS9 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37266 gsl12, ATGSL12 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000142_P001 ATGSL10, gsl10,... callose synthase 0.03 OrthoFinder output from all 47 species
Zm00001e020194_P001 GSL5, PMR4,... callose synthase 0.02 OrthoFinder output from all 47 species
Zm00001e030137_P001 gsl12, ATGSL12,... callose synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA Interproscan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA Interproscan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR026899 FKS1-like_dom1 316 427
IPR039431 Vta1/CALS_N 40 185
IPR003440 Glyco_trans_48 1154 1761
IPR003440 Glyco_trans_48 1063 1143
No external refs found!